5ENT
Minocycline bound structure of bacterial efflux pump.
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PETRA III, EMBL c/o DESY BEAMLINE P13 (MX1) |
Synchrotron site | PETRA III, EMBL c/o DESY |
Beamline | P13 (MX1) |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2015-11-01 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.97625 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 109.557, 145.409, 175.612 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 50.000 - 2.500 |
R-factor | 0.19601 |
Rwork | 0.193 |
R-free | 0.24768 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5en5 |
RMSD bond length | 0.014 |
RMSD bond angle | 1.655 |
Data reduction software | xia2 |
Data scaling software | XDS |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0135) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.590 |
High resolution limit [Å] | 2.500 | 2.500 |
Rmerge | 0.162 | 1.241 |
Number of reflections | 96991 | |
<I/σ(I)> | 11.5 | |
Completeness [%] | 99.3 | 99.3 |
Redundancy | 9 | 8.9 |
CC(1/2) | 0.997 | 0.617 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 291 | 0.1 M MES pH6.5, 0.21 M NaCl, 11.5% PEG4000 |