5EMH
Crystal structure of Iridoid Synthase from Cantharanthus roseus in complex with NADP+
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | RRCAT INDUS-2 BEAMLINE PX-BL21 |
Synchrotron site | RRCAT INDUS-2 |
Beamline | PX-BL21 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2015-03-23 |
Detector | MAR CCD 165 mm |
Wavelength(s) | 0.979470 |
Spacegroup name | P 43 21 2 |
Unit cell lengths | 66.861, 66.861, 173.065 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 43.678 - 2.100 |
R-factor | 0.184 |
Rwork | 0.182 |
R-free | 0.21560 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2v6f |
RMSD bond length | 0.002 |
RMSD bond angle | 0.783 |
Data reduction software | XDS |
Data scaling software | Aimless (0.2.8) |
Phasing software | PHASER |
Refinement software | PHENIX (1.9_1692) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 47.280 | 47.280 | 2.160 |
High resolution limit [Å] | 2.100 | 8.910 | 2.100 |
Rmerge | 0.119 | 0.023 | 0.792 |
Rpim | 0.036 | 0.008 | 0.235 |
Total number of observations | 281155 | 3681 | 22930 |
Number of reflections | 23849 | ||
<I/σ(I)> | 21.1 | 68.8 | 4 |
Completeness [%] | 100.0 | 99.5 | 100 |
Redundancy | 11.8 | 9.3 | 12 |
CC(1/2) | 0.999 | 1.000 | 0.890 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 5.6 | 298 | PEG 4000, Trisodium citrate, MPD |