5EL1
Crystal structure of deoxyribose-phosphate aldolase from Escherichia coli (K58E-Y96W mutant) after acetaldehyde treatment
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID29 |
Synchrotron site | ESRF |
Beamline | ID29 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2015-07-25 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 1.000 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 110.830, 53.300, 37.810 |
Unit cell angles | 90.00, 98.29, 90.00 |
Refinement procedure
Resolution | 47.939 - 1.250 |
R-factor | 0.118 |
Rwork | 0.117 |
R-free | 0.14370 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5eky |
RMSD bond length | 0.010 |
RMSD bond angle | 1.176 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | MOLREP |
Refinement software | PHENIX |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 47.939 | 1.280 | |
High resolution limit [Å] | 1.250 | 5.590 | 1.250 |
Rmerge | 0.073 | 0.074 | 0.316 |
Rmeas | 0.088 | 0.089 | 0.388 |
Total number of observations | 168617 | ||
Number of reflections | 58911 | 684 | 4066 |
<I/σ(I)> | 8.63 | 17.97 | 2.68 |
Completeness [%] | 97.7 | 95.9 | 90.7 |
Redundancy | 2.9 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.5 | 293 | PEG 4000, 2-propanol, HEPES buffer |