5EAR
Crystal structure of human WDR5 in complex with compound 9d
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU FR-E+ SUPERBRIGHT |
Temperature [K] | 100 |
Detector technology | IMAGE PLATE |
Collection date | 2012-01-13 |
Detector | RIGAKU RAXIS HTC |
Wavelength(s) | 1.5418 |
Spacegroup name | P 1 |
Unit cell lengths | 46.640, 53.615, 64.707 |
Unit cell angles | 107.92, 90.95, 109.66 |
Refinement procedure
Resolution | 50.000 - 1.800 |
R-factor | 0.1534 |
Rwork | 0.153 |
R-free | 0.18500 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3ur4 |
RMSD bond length | 0.010 |
RMSD bond angle | 1.394 |
Data scaling software | HKL-2000 |
Phasing software | MOLREP |
Refinement software | REFMAC (5.8.0131) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 1.830 |
High resolution limit [Å] | 1.800 | 4.880 | 1.800 |
Rmerge | 0.042 | 0.030 | 0.207 |
Total number of observations | 192066 | ||
Number of reflections | 48569 | ||
<I/σ(I)> | 17 | ||
Completeness [%] | 94.1 | 98.8 | 89.8 |
Redundancy | 4 | 3.9 | 4 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 5.5 | 291 | 22% PEG 3350, 0.1M NH4SO4, 0.1 M BisTris pH5.5 |