5E7B
Structure of a nanobody (vHH) from camel against phage Tuc2009 RBP (BppL, ORF53)
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | SOLEIL BEAMLINE PROXIMA 1 |
| Synchrotron site | SOLEIL |
| Beamline | PROXIMA 1 |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2015-06-06 |
| Detector | PSI PILATUS 6M |
| Wavelength(s) | 0.86 |
| Spacegroup name | P 65 2 2 |
| Unit cell lengths | 52.080, 52.080, 162.690 |
| Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
| Resolution | 14.970 - 1.100 |
| R-factor | 0.1595 |
| Rwork | 0.158 |
| R-free | 0.18920 |
| Structure solution method | SAD |
| RMSD bond length | 0.010 |
| RMSD bond angle | 1.367 |
| Data reduction software | XDS |
| Data scaling software | XSCALE |
| Phasing software | PHASER |
| Refinement software | PHENIX (1.9_1692) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 45.100 | 1.130 |
| High resolution limit [Å] | 1.100 | 1.100 |
| Rmerge | 0.068 | 1.550 |
| Number of reflections | 52014 | |
| <I/σ(I)> | 18.4 | 1.5 |
| Completeness [%] | 96.6 | 91.7 |
| Redundancy | 19.5 | 19.2 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 7.4 | 293 | mixing 100-300 nl of 12 mg.mL-1 protein (Na2HPO4, 10 mM; KH2PO4, 1.8 mM, pH7.4; NaCl, 137 mM; KCl, 2.7mM) with 100 nl precipitant solution in 25-30 % PEG4000, 0.2 M Imidazole (pH 6.0). |






