Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5E1M

Crystal structure of NTMT1 in complex with PPKRIA peptide

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeROTATING ANODE
Source detailsRIGAKU FR-E SUPERBRIGHT
Temperature [K]100
Detector technologyCCD
Collection date2015-06-22
DetectorRIGAKU SATURN A200
Wavelength(s)1.5418
Spacegroup nameP 65 2 2
Unit cell lengths107.406, 107.406, 205.604
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution29.680 - 1.750
R-factor0.1621
Rwork0.161
R-free0.18820
Structure solution methodFOURIER SYNTHESIS
Starting model (for MR)isomorphous crystal structure of same protein.
RMSD bond length0.017
RMSD bond angle1.758
Data reduction softwareXDS
Data scaling softwareAimless (0.5.9)
Refinement softwareREFMAC (5.8.0131)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]29.68029.6801.780
High resolution limit [Å]1.7509.0901.750
Rmerge0.1080.0310.942
Rmeas0.1110.0320.966
Rpim0.0240.0080.210
Total number of observations1466692925678475
Number of reflections71201
<I/σ(I)>2782.74.3
Completeness [%]100.097.299.9
Redundancy20.61520.4
CC(1/2)0.9991.0000.910
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP27726% PEG3350, 16% tacsimate

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon