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5E1I

Crystal structure of Mycobacterium tuberculosis L,D-transpeptidase 2 with carbapenem drug T210

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 19-ID
Synchrotron siteAPS
Beamline19-ID
Temperature [K]100
Detector technologyCCD
Collection date2015-03-16
DetectorADSC QUANTUM 315
Wavelength(s)0.978
Spacegroup nameP 1 21 1
Unit cell lengths61.183, 93.957, 75.391
Unit cell angles90.00, 93.04, 90.00
Refinement procedure
Resolution37.242 - 2.003
R-factor0.1926
Rwork0.191
R-free0.22490
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)3vyn
RMSD bond length0.008
RMSD bond angle1.180
Data reduction softwareHKL-3000
Data scaling softwareHKL-2000
Phasing softwarePHASER
Refinement softwarePHENIX (1.9_1692)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]50.00037.2402.030
High resolution limit [Å]2.0005.4302.000
Rmerge0.0900.0540.429
Number of reflections56440
<I/σ(I)>10.7
Completeness [%]98.698.797.2
Redundancy7.47.27.4
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP291PEG5000MME, Ammonium sulfate

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