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5DYK

Crystal structure of the cGMP-dependent protein kinase PKG from Plasmodium falciparum - Apo form

Replaces:  4MYJ
Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 19-ID
Synchrotron siteAPS
Beamline19-ID
Temperature [K]100
Detector technologyCCD
Collection date2013-08-16
DetectorADSC QUANTUM 315
Wavelength(s)0.97918
Spacegroup nameC 2 2 21
Unit cell lengths94.509, 127.284, 215.104
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution40.000 - 2.450
R-factor0.2061
Rwork0.204
R-free0.24050
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)4MYI
RMSD bond length0.007
RMSD bond angle1.151
Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwarePHASER
Refinement softwareREFMAC (5.8.0131)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]40.00040.0002.490
High resolution limit [Å]2.4506.6402.450
Rmerge0.0930.0310.935
Total number of observations223523
Number of reflections47350
<I/σ(I)>8.3
Completeness [%]96.699.493.1
Redundancy4.75.14.4
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP7.82930.4M L-Proline, 10% Peg 3350, 0.1M Hepes 7.8 15% EG

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