Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5DYI

Structure of p97 N-D1 wild-type in complex with ADP

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 22-ID
Synchrotron siteAPS
Beamline22-ID
Temperature [K]100
Detector technologyCCD
Collection date2009-03-01
DetectorRAYONIX MX300HS
Wavelength(s)1.0
Spacegroup nameP 21 21 21
Unit cell lengths146.440, 176.210, 256.870
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution50.000 - 3.710
R-factor0.25037
Rwork0.249
R-free0.28527
RMSD bond length0.012
RMSD bond angle1.635
Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwareMOLREP
Refinement softwareREFMAC (5.8.0124)
Data quality characteristics
 Overall
Low resolution limit [Å]50.000
High resolution limit [Å]3.710
Number of reflections62997
<I/σ(I)>7.12
Completeness [%]88.8
Redundancy4.9
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP62890.1 M sodium citrate, pH 6.0, 0.3 M NaCl, 15.2 % PEG3350, 20 % glycerol, 2 % benzamidine

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon