Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5DLT

Crystal structure of Autotaxin (ENPP2) with 7-alpha-hydroxycholesterol

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsESRF BEAMLINE ID29
Synchrotron siteESRF
BeamlineID29
Temperature [K]100
Detector technologyPIXEL
Collection date2011-08-30
DetectorDECTRIS PILATUS 6M-F
Wavelength(s)0.97935
Spacegroup nameP 1
Unit cell lengths53.671, 63.482, 70.715
Unit cell angles98.72, 105.80, 99.97
Refinement procedure
Resolution44.020 - 1.600
R-factor0.1725
Rwork0.171
R-free0.19640
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)2xr9
RMSD bond length0.012
RMSD bond angle1.450
Data reduction softwareXDS
Data scaling softwareAimless
Phasing softwarePHASER
Refinement softwareREFMAC (5.8.0129)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]44.02044.0201.630
High resolution limit [Å]1.6008.7601.600
Rmerge0.0650.0290.868
Rpim0.0610.0270.815
Total number of observations20564613459720
Number of reflections105202
<I/σ(I)>6.723.90.8
Completeness [%]92.19288.9
Redundancy22.11.9
CC(1/2)0.9970.9960.437
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP6293PEG 3350, 0.1M ammonium iodide 0.3M sodium thiocyanate, 23.5mg/ml heparin sulfate

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon