5CYK
Structure of Ytm1 bound to the C-terminal domain of Erb1-R486E
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I02 |
Synchrotron site | Diamond |
Beamline | I02 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2015-05-07 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.979 |
Spacegroup name | P 65 2 2 |
Unit cell lengths | 170.750, 170.750, 155.660 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 85.375 - 3.000 |
R-factor | 0.2045 |
Rwork | 0.202 |
R-free | 0.26210 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5cxc |
RMSD bond length | 0.006 |
RMSD bond angle | 1.345 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHENIX |
Refinement software | PHENIX (1.9_1692) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 85.380 | 3.180 |
High resolution limit [Å] | 3.000 | 3.000 |
Rmerge | 0.176 | 1.862 |
Number of reflections | 27367 | |
<I/σ(I)> | 13.5 | 1.6 |
Completeness [%] | 100.0 | 100 |
Redundancy | 12.2 | 12.7 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.5 | 297 | 0.1M Hepes pH 7.5, 2M Ammonium Sulfate |