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5CYK

Structure of Ytm1 bound to the C-terminal domain of Erb1-R486E

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsDIAMOND BEAMLINE I02
Synchrotron siteDiamond
BeamlineI02
Temperature [K]100
Detector technologyPIXEL
Collection date2015-05-07
DetectorDECTRIS PILATUS 6M
Wavelength(s)0.979
Spacegroup nameP 65 2 2
Unit cell lengths170.750, 170.750, 155.660
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution85.375 - 3.000
R-factor0.2045
Rwork0.202
R-free0.26210
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)5cxc
RMSD bond length0.006
RMSD bond angle1.345
Data reduction softwareXDS
Data scaling softwareAimless
Phasing softwarePHENIX
Refinement softwarePHENIX (1.9_1692)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]85.3803.180
High resolution limit [Å]3.0003.000
Rmerge0.1761.862
Number of reflections27367
<I/σ(I)>13.51.6
Completeness [%]100.0100
Redundancy12.212.7
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP7.52970.1M Hepes pH 7.5, 2M Ammonium Sulfate

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PDB entries from 2024-05-15

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