5CUJ
Crystal structure of Human Defensin-5 Y27A mutant crystal form 2.
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRL BEAMLINE BL12-2 |
Synchrotron site | SSRL |
Beamline | BL12-2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2015-07-04 |
Detector | PSI PILATUS 6M |
Wavelength(s) | 0.9795 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 73.758, 59.758, 47.284 |
Unit cell angles | 90.00, 105.54, 90.00 |
Refinement procedure
Resolution | 45.740 - 2.080 |
R-factor | 0.23729 |
Rwork | 0.235 |
R-free | 0.29206 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1zmp |
RMSD bond length | 0.005 |
RMSD bond angle | 1.109 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0124) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.130 |
High resolution limit [Å] | 2.080 | 2.080 |
Rmerge | 0.109 | 0.538 |
Number of reflections | 11584 | |
<I/σ(I)> | 11 | 1.1 |
Completeness [%] | 97.4 | 92.3 |
Redundancy | 3.3 | 2.6 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.5 | 294 | 3 M sodium chloride, 5% MPD, 0.1 M calcium chloride, and 0.1 M imidazole pH 6.5 |