5CS8
Crystal Structure of the first bromodomain of human BRD4 in complex with benzo[cd]indol-2(1H)-one ligand
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | OTHER |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2015-06-22 |
| Detector | PSI PILATUS 6M |
| Wavelength(s) | 0.97852 |
| Spacegroup name | P 21 21 21 |
| Unit cell lengths | 34.960, 47.220, 78.080 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 40.410 - 1.620 |
| R-factor | 0.1907 |
| Rwork | 0.189 |
| R-free | 0.21520 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 3mxf |
| RMSD bond length | 0.013 |
| RMSD bond angle | 1.634 |
| Data reduction software | MOSFLM |
| Data scaling software | Aimless (0.5.9) |
| Phasing software | MOLREP |
| Refinement software | REFMAC (5.8.0123) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 78.080 | 78.080 | 1.640 |
| High resolution limit [Å] | 1.620 | 8.860 | 1.620 |
| Rmerge | 0.057 | 0.061 | 0.197 |
| Rpim | 0.026 | 0.028 | 0.086 |
| Total number of observations | 87080 | 703 | 4734 |
| Number of reflections | 15614 | ||
| <I/σ(I)> | 15 | 26.9 | 5.4 |
| Completeness [%] | 91.1 | 99.7 | 99.8 |
| Redundancy | 5.6 | 5.1 | 5.8 |
| CC(1/2) | 0.998 | 0.992 | 0.984 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 8.3 | 277 | 20% PEG3350, 0.2M NaNO3, 0.1M HEPES, 10% EtGhly, pH 8.3 |






