5CQ7
Crystal structure of the bromodomain of bromodomain adjacent to zinc finger domain protein 2B (BAZ2B) in complex with N,N-dimethylquinoxaline-6-carboxamide (SGC - Diamond I04-1 fragment screening)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I04-1 |
Synchrotron site | Diamond |
Beamline | I04-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2014-05-16 |
Detector | PSI PILATUS 6M |
Wavelength(s) | 0.92001 |
Spacegroup name | C 2 2 21 |
Unit cell lengths | 82.850, 96.560, 57.880 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 42.510 - 1.860 |
R-factor | 0.1767 |
Rwork | 0.174 |
R-free | 0.23000 |
Structure solution method | MOLECULAR REPLACEMENT |
Data scaling software | Aimless (0.2.17) |
Refinement software | PHENIX |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 42.510 | 42.510 | 1.910 |
High resolution limit [Å] | 1.860 | 8.320 | 1.860 |
Rmerge | 0.044 | 0.017 | 0.595 |
Rpim | 0.028 | 0.011 | 0.367 |
Total number of observations | 128725 | 1550 | 10097 |
Number of reflections | 37326 | ||
<I/σ(I)> | 16.4 | 52.3 | 2.2 |
Completeness [%] | 97.7 | 95.9 | 99.3 |
Redundancy | 3.4 | 3.6 | 3.6 |
CC(1/2) | 0.999 | 0.998 | 0.786 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6 | 277 | 20% PEG6000 , 10% ethylene glycol , 0.1M MES pH 6.0 , 0.1M calcium chloride |