5CG2
Crystal structure of E. coli FabI bound to the thiocarbamoylated benzodiazaborine inhibitor 35b.
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRL BEAMLINE BL12-2 |
Synchrotron site | SSRL |
Beamline | BL12-2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2014-06-20 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.97950 |
Spacegroup name | P 61 2 2 |
Unit cell lengths | 79.913, 79.913, 323.789 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 69.210 - 2.110 |
R-factor | 0.2039 |
Rwork | 0.202 |
R-free | 0.24130 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5cfz |
RMSD bond length | 0.012 |
RMSD bond angle | 1.492 |
Data reduction software | XDS |
Data scaling software | SCALA (3.3.20) |
Phasing software | PHASER |
Refinement software | REFMAC (5.6.0117) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 69.210 | 39.656 | 2.230 |
High resolution limit [Å] | 2.110 | 6.680 | 2.110 |
Rmerge | 0.032 | 0.115 | |
Rmeas | 0.049 | ||
Rpim | 0.012 | 0.008 | 0.030 |
Total number of observations | 624835 | 20988 | 69022 |
Number of reflections | 36240 | ||
<I/σ(I)> | 42.6 | 64.5 | 18.1 |
Completeness [%] | 99.3 | 99.5 | 95 |
Redundancy | 17.2 | 15.3 | 14 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7 | 298 | 0.1M citrate pH 7.0, 0.1M ammonium sulfate, 22%w/v PEG 2000 |