Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5CEE

Malic enzyme from Candidatus Phytoplasma AYWB in complex with NAD and Mg2+

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeROTATING ANODE
Source detailsRIGAKU MICROMAX-007 HF
Temperature [K]100
Detector technologyIMAGE PLATE
Collection date2013-07-17
DetectorMAR scanner 345 mm plate
Wavelength(s)1.5418
Spacegroup nameP 31 2 1
Unit cell lengths48.236, 48.236, 291.068
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution24.256 - 2.498
R-factor0.1568
Rwork0.146
R-free0.19470
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)2dvm
RMSD bond length0.008
RMSD bond angle1.151
Data reduction softwareXDS
Data scaling softwareSCALA
Phasing softwarePHASER
Refinement softwarePHENIX ((phenix.refine: 1.9_1692))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]29.4702.630
High resolution limit [Å]2.4982.498
Rmerge0.0660.701
Number of reflections14448
<I/σ(I)>20.22.4
Completeness [%]98.490.7
Redundancy6.44.1
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP8.52770.2 M MgCl2; 0.1 M Tris pH 8.5; 30% PEG 4000

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon