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5CE1

Crystal Structure of Serine protease Hepsin in complex with Inhibitor

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeROTATING ANODE
Source detailsRIGAKU RU300
Temperature [K]100
Detector technologyIMAGE PLATE
Collection date2012-02-12
DetectorRIGAKU RAXIS IV++
Wavelength(s)1.5
Spacegroup nameP 1 21 1
Unit cell lengths59.583, 47.678, 60.784
Unit cell angles90.00, 105.30, 90.00
Refinement procedure
Resolution58.630 - 2.500
R-factor0.19165
Rwork0.187
R-free0.28150
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1z8g
RMSD bond length0.014
RMSD bond angle1.695
Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwareMOLREP
Refinement softwareREFMAC (5.7.0029)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]100.0002.590
High resolution limit [Å]2.5002.500
Rmerge0.0740.229
Number of reflections10137
<I/σ(I)>2.4
Completeness [%]87.489.9
Redundancy2.62.2
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP6293Activated hepsin was incubated with 10 mM Benzamidine at 4 oC for 2 hours and concentrated to7 mg/ml using 10 KDa cut off centricon [Millipore]. 1microlit of protein was mixed with 1 microlit of reservoir buffer containing 100 mM sodium Cacodylate (6.0), 22% PEG 3350, and 200 mM ammonium fluoride. Plate clusters with a dimension of 50 micron m x 100 micron m were observed after 2 days of crystallization set up.

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