5CCM
Crystal structure of SMYD3 with SAM and EPZ030456
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 22-ID |
Synchrotron site | APS |
Beamline | 22-ID |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2015-02-22 |
Detector | RAYONIX MX300HS |
Wavelength(s) | 1.000 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 60.484, 65.852, 107.358 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 50.000 - 2.300 |
R-factor | 0.2033 |
Rwork | 0.201 |
R-free | 0.25510 |
RMSD bond length | 0.006 |
RMSD bond angle | 1.211 |
Data reduction software | HKL-2000 |
Data scaling software | SCALEPACK |
Refinement software | REFMAC (5.8.0073) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 2.380 |
High resolution limit [Å] | 2.300 | 4.950 | 2.300 |
Rmerge | 0.146 | 0.066 | 0.480 |
Rmeas | 0.162 | 0.074 | 0.566 |
Rpim | 0.069 | 0.031 | 0.288 |
Total number of observations | 98933 | ||
Number of reflections | 19568 | ||
<I/σ(I)> | 6 | ||
Completeness [%] | 98.4 | 99.5 | 90.2 |
Redundancy | 5.1 | 5.4 | 2.5 |
CC(1/2) | 0.996 | 0.816 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 8 | 293 | 0.10 M Magnesium formate, 0.1M Tris 8.0, 14% w/v PEG 3350 |