5C7Z
AP2 Mu2 adaptin C-terminal domain complexed with integrin alpha-4 peptide
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | ROTATING ANODE |
| Source details | RIGAKU FR-E DW |
| Temperature [K] | 100 |
| Detector technology | IMAGE PLATE |
| Collection date | 2014-08-08 |
| Detector | MAR scanner 345 mm plate |
| Wavelength(s) | 1.54182 |
| Spacegroup name | P 64 |
| Unit cell lengths | 125.650, 125.650, 74.410 |
| Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
| Resolution | 74.000 - 2.770 |
| R-factor | 0.1768 |
| Rwork | 0.174 |
| R-free | 0.22430 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 1bxx |
| RMSD bond length | 0.019 |
| RMSD bond angle | 2.084 |
| Data reduction software | MOSFLM |
| Data scaling software | Aimless |
| Phasing software | PHASER |
| Refinement software | REFMAC (5.8.0123) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 74.000 | 2.900 |
| High resolution limit [Å] | 2.750 | 2.750 |
| Rmerge | 0.062 | 0.325 |
| Number of reflections | 17034 | |
| <I/σ(I)> | 14.2 | 3.7 |
| Completeness [%] | 97.2 | 80.8 |
| Redundancy | 4.9 | 4.6 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 7.1 | 293 | 2.2M NaCl, 0.4M Na/K phosphate, 10MM DTT 0.1M MES pH 7.1, 15% glycerol, molar ratio of peptide to protein 3:1 |
