Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5C25

Crystal Structure of HIV-1 Reverse Transcriptase in Complex with 6-((4-((4-cyanophenyl)amino)-1,3,5-triazin-2-yl)amino)-5,7-dimethyl-2-naphthonitrile (JLJ639), a Non-nucleoside Inhibitor

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 24-ID-E
Synchrotron siteAPS
Beamline24-ID-E
Temperature [K]100
Detector technologyCCD
Collection date2015-04-05
DetectorADSC QUANTUM 315
Wavelength(s)0.979
Spacegroup nameC 1 2 1
Unit cell lengths162.554, 72.969, 109.479
Unit cell angles90.00, 100.66, 90.00
Refinement procedure
Resolution43.458 - 2.841
R-factor0.2185
Rwork0.216
R-free0.26310
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)2zd1
RMSD bond length0.002
RMSD bond angle0.552
Data reduction softwareXDS (March 1, 2015)
Data scaling softwareXDS (March 1, 2015)
Phasing softwarePHASER (1.9_1692)
Refinement softwarePHENIX (1.9_1692)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0003.010
High resolution limit [Å]2.8402.840
Rmerge0.459
Number of reflections29671
<I/σ(I)>14.612.95
Completeness [%]98.995.7
Redundancy3.73.46
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP727714% PEG 8000, 100 mM Ammonium sulfate, 15 mM magnesium sulfate, 5 mM spermine, 15 mM HEPES pH 7.0

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon