5C25
Crystal Structure of HIV-1 Reverse Transcriptase in Complex with 6-((4-((4-cyanophenyl)amino)-1,3,5-triazin-2-yl)amino)-5,7-dimethyl-2-naphthonitrile (JLJ639), a Non-nucleoside Inhibitor
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 24-ID-E |
Synchrotron site | APS |
Beamline | 24-ID-E |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2015-04-05 |
Detector | ADSC QUANTUM 315 |
Wavelength(s) | 0.979 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 162.554, 72.969, 109.479 |
Unit cell angles | 90.00, 100.66, 90.00 |
Refinement procedure
Resolution | 43.458 - 2.841 |
R-factor | 0.2185 |
Rwork | 0.216 |
R-free | 0.26310 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2zd1 |
RMSD bond length | 0.002 |
RMSD bond angle | 0.552 |
Data reduction software | XDS (March 1, 2015) |
Data scaling software | XDS (March 1, 2015) |
Phasing software | PHASER (1.9_1692) |
Refinement software | PHENIX (1.9_1692) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 3.010 |
High resolution limit [Å] | 2.840 | 2.840 |
Rmerge | 0.459 | |
Number of reflections | 29671 | |
<I/σ(I)> | 14.61 | 2.95 |
Completeness [%] | 98.9 | 95.7 |
Redundancy | 3.7 | 3.46 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7 | 277 | 14% PEG 8000, 100 mM Ammonium sulfate, 15 mM magnesium sulfate, 5 mM spermine, 15 mM HEPES pH 7.0 |