Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5C0R

Crystal Structure of a Generation 3 Influenza Hemagglutinin Stabilized Stem Complexed with the Broadly Neutralizing Antibody C179

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 22-BM
Synchrotron siteAPS
Beamline22-BM
Temperature [K]100
Detector technologyCCD
Collection date2010-12-10
DetectorMARMOSAIC 225 mm CCD
Wavelength(s)1.000
Spacegroup nameH 3
Unit cell lengths112.038, 112.038, 205.125
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution32.343 - 3.188
R-factor0.2018
Rwork0.199
R-free0.25060
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1RU7 (5-36 315-323 chain A 514-559 590-660 chain B) 1SZT (3-29 42-67 chain A) 1Q9K (1-111 chain B) 1UWX (3-108 chain K) 1RFO (1-27 chain A)
RMSD bond length0.003
RMSD bond angle0.664
Data reduction softwareHKL-2000
Data scaling softwareSCALEPACK
Phasing softwarePHASER
Refinement softwarePHENIX (1.8.4_1496)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0003.300
High resolution limit [Å]3.1883.188
Rmerge0.0670.413
Number of reflections15742
<I/σ(I)>19.22.6
Completeness [%]98.387.1
Redundancy4.53.1
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP8.529315% (w/v) PEG 1500, 5% (v/v) MPD, 200 mM ammonium chloride, 100 mM Tris, pH 8.5

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon