5C0R
Crystal Structure of a Generation 3 Influenza Hemagglutinin Stabilized Stem Complexed with the Broadly Neutralizing Antibody C179
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 22-BM |
Synchrotron site | APS |
Beamline | 22-BM |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2010-12-10 |
Detector | MARMOSAIC 225 mm CCD |
Wavelength(s) | 1.000 |
Spacegroup name | H 3 |
Unit cell lengths | 112.038, 112.038, 205.125 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 32.343 - 3.188 |
R-factor | 0.2018 |
Rwork | 0.199 |
R-free | 0.25060 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1RU7 (5-36 315-323 chain A 514-559 590-660 chain B) 1SZT (3-29 42-67 chain A) 1Q9K (1-111 chain B) 1UWX (3-108 chain K) 1RFO (1-27 chain A) |
RMSD bond length | 0.003 |
RMSD bond angle | 0.664 |
Data reduction software | HKL-2000 |
Data scaling software | SCALEPACK |
Phasing software | PHASER |
Refinement software | PHENIX (1.8.4_1496) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 3.300 |
High resolution limit [Å] | 3.188 | 3.188 |
Rmerge | 0.067 | 0.413 |
Number of reflections | 15742 | |
<I/σ(I)> | 19.2 | 2.6 |
Completeness [%] | 98.3 | 87.1 |
Redundancy | 4.5 | 3.1 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 8.5 | 293 | 15% (w/v) PEG 1500, 5% (v/v) MPD, 200 mM ammonium chloride, 100 mM Tris, pH 8.5 |