Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5B0W

Crystal structure of the 11-cis isomer of pharaonis halorhodopsin in the absence of halide ions

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSPRING-8 BEAMLINE BL38B1
Synchrotron siteSPring-8
BeamlineBL38B1
Temperature [K]100
Detector technologyCCD
Collection date2015-06-11
DetectorRAYONIX MX225HE
Wavelength(s)1
Spacegroup nameC 1 2 1
Unit cell lengths154.320, 97.930, 101.530
Unit cell angles90.00, 128.67, 90.00
Refinement procedure
Resolution15.000 - 1.700
Rwork0.202
R-free0.21540
RMSD bond length0.012
RMSD bond angle1.450
Data reduction softwareSCALA
Data scaling softwareSCALA
Phasing softwareMOLREP
Refinement softwareCNS (1.21)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.7001.790
High resolution limit [Å]1.7001.700
Rmerge0.0590.393
Number of reflections125077
<I/σ(I)>11.72.4
Completeness [%]96.881.8
Redundancy3.22.4
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP6288A mixture solution containing 3mg/ml halorhodopsin, 1M ammonium sulfate, 0.1M NaCl, 0.1 M sodium citrate, and 5.7mg/ml nonylglucoside was concentrated by the sitting-drop vapor diffusion method. Before data collection, the crystal was soaked in an alkaline solution containing no halide ions, illuminated with red light, and then soaked in a solution at pH 7.

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon