4ZZ3
Human GAR transformylase in complex with GAR and pemetrexed
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 4.2.2 |
Synchrotron site | ALS |
Beamline | 4.2.2 |
Temperature [K] | 100 |
Detector technology | CMOS |
Collection date | 2015-01-28 |
Detector | RDI CMOS_8M |
Wavelength(s) | 1.0001 |
Spacegroup name | P 32 2 1 |
Unit cell lengths | 74.983, 74.983, 100.934 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 39.848 - 2.504 |
R-factor | 0.2002 |
Rwork | 0.196 |
R-free | 0.24330 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4YKS |
RMSD bond length | 0.002 |
RMSD bond angle | 0.695 |
Data scaling software | SCALEPACK (2.5.6) |
Phasing software | PHASER |
Refinement software | PHENIX (phenix.refine 1.9) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 2.540 |
High resolution limit [Å] | 2.500 | 6.780 | 2.500 |
Rmerge | 0.067 | 0.058 | 0.356 |
Rmeas | 0.072 | 0.062 | 0.398 |
Rpim | 0.025 | 0.021 | 0.175 |
Total number of observations | 93726 | ||
Number of reflections | 11694 | ||
<I/σ(I)> | 17.5 | ||
Completeness [%] | 99.6 | 97.4 | 99.4 |
Redundancy | 8 | 8.4 | 4.9 |
CC(1/2) | 0.995 | 0.904 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.5 | 277 | 18 % PEG4000, 2 % PEG400, 0.33 M NaCl |