4ZWR
Crystal Structure of the Bacteriophage T4 recombination mediator protein UvsY, Lattice Type II
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 8.2.2 |
Synchrotron site | ALS |
Beamline | 8.2.2 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2010-09-08 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.97930 |
Spacegroup name | C 2 2 21 |
Unit cell lengths | 85.600, 123.830, 302.730 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 19.911 - 3.386 |
R-factor | 0.2405 |
Rwork | 0.239 |
R-free | 0.26650 |
Structure solution method | SAD |
RMSD bond length | 0.001 |
RMSD bond angle | 0.333 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | SHELX |
Refinement software | PHENIX (1.9_1692) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 20.000 | 20.000 | 3.520 |
High resolution limit [Å] | 3.386 | 7.220 | 3.386 |
Rmerge | 0.151 | 0.110 | 0.938 |
Rmeas | 0.163 | 0.120 | |
Rpim | 0.063 | 0.046 | 0.393 |
Total number of observations | 93454 | ||
Number of reflections | 14057 | ||
<I/σ(I)> | 6.9 | 1.76 | |
Completeness [%] | 63.9 | 99.6 | 7.4 |
Redundancy | 6.6 | 6.6 | 6.6 |
CC(1/2) | 0.993 | 0.785 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.4 | 277 | 1:1 Se-Met-labeled UvsY (12 mg/mL in 0.5 M sodium chloride, 15 mM HEPES, pH 8.2, 2 mM DTT) to 18% MPD, 225 mM sodium chloride, 0.1 M MES, pH 6.4, sample subjected to reductive alkylation with formaldehyde prior to crystallization |