4ZW3
X-ray crystal structure of PfA-M1 in complex with hydroxamic acid-based inhibitor 9b
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | AUSTRALIAN SYNCHROTRON BEAMLINE MX2 |
Synchrotron site | Australian Synchrotron |
Beamline | MX2 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2014-07-03 |
Detector | ADSC QUANTUM 210r |
Wavelength(s) | 1.0000 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 75.230, 109.340, 117.700 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 44.226 - 1.800 |
R-factor | 0.1616 |
Rwork | 0.160 |
R-free | 0.19600 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3ebg |
RMSD bond length | 0.007 |
RMSD bond angle | 1.008 |
Data reduction software | MOSFLM |
Data scaling software | Aimless (0.3.8) |
Phasing software | PHASER |
Refinement software | PHENIX (1.8.4_1496) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 80.110 | 80.110 | 1.830 |
High resolution limit [Å] | 1.800 | 9.690 | 1.800 |
Rmerge | 0.174 | 0.053 | 2.091 |
Rpim | 0.070 | 0.023 | 0.849 |
Total number of observations | 639057 | 4298 | 30858 |
Number of reflections | 89885 | ||
<I/σ(I)> | 9.8 | 24.5 | 1.5 |
Completeness [%] | 99.3 | 99.1 | 98.1 |
Redundancy | 7.1 | 6.4 | 6.8 |
CC(1/2) | 0.996 | 0.996 | 0.498 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 8.5 | 298 | 22% (v/v) PEG 8000, 10% (v/v) glycerol, 0.1 M Tris pH 8.5, 0.2 M MgCl2 |