4ZVY
Structure of human ALDH7A1 complexed with NAD+ in space group P4212
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 4.2.2 |
Synchrotron site | ALS |
Beamline | 4.2.2 |
Temperature [K] | 100 |
Detector technology | CMOS |
Collection date | 2014-09-24 |
Detector | RDI CMOS_8M |
Wavelength(s) | 1.00 |
Spacegroup name | P 4 21 2 |
Unit cell lengths | 159.111, 159.111, 79.670 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 53.070 - 1.900 |
R-factor | 0.1833 |
Rwork | 0.182 |
R-free | 0.21340 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2j6l |
RMSD bond length | 0.007 |
RMSD bond angle | 0.967 |
Data reduction software | XDS |
Data scaling software | Aimless (0.3.6) |
Phasing software | PHASER |
Refinement software | PHENIX (1.9_1692) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 53.070 | 53.070 | 1.940 |
High resolution limit [Å] | 1.900 | 9.690 | 1.900 |
Rmerge | 0.102 | 0.025 | 1.445 |
Rpim | 0.028 | 0.007 | 0.411 |
Total number of observations | 1178496 | 8968 | 57933 |
Number of reflections | 80661 | ||
<I/σ(I)> | 24 | 84.4 | 1.8 |
Completeness [%] | 99.8 | 99.3 | 96.8 |
Redundancy | 14.6 | 12.4 | 13.1 |
CC(1/2) | 0.999 | 0.999 | 0.697 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293 | The reservoir contained 0.1 M Hepes pH 7.5, 0.1 M magnesium chloride hexahydrate, and 20% (w/v) PEG 3350. |