4ZTE
Crystal structure of human E-Cadherin (residues 3-213) in complex with a peptidomimetic inhibitor
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X06DA |
Synchrotron site | SLS |
Beamline | X06DA |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2014-12-16 |
Detector | PSI PILATUS 6M |
Wavelength(s) | 1.0 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 120.579, 76.835, 72.772 |
Unit cell angles | 90.00, 111.14, 90.00 |
Refinement procedure
Resolution | 42.260 - 2.130 |
R-factor | 0.18735 |
Rwork | 0.185 |
R-free | 0.22951 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4zt1 |
RMSD bond length | 0.003 |
RMSD bond angle | 0.487 |
Data reduction software | XDS |
Data scaling software | SCALA |
Phasing software | MOLREP |
Refinement software | REFMAC (5.8.0073) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 48.820 | 2.250 |
High resolution limit [Å] | 2.130 | 2.130 |
Rmerge | 0.129 | 0.123 |
Number of reflections | 33775 | |
<I/σ(I)> | 7.3 | 0.6 |
Completeness [%] | 98.7 | 93.5 |
Redundancy | 6 | 5.3 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 8.5 | 298 | TRIS 0.1 M, ammonium sulfate 1.3 M, calcium chloride 80 mM |