4ZNY
Structure of the human TSG101-UEV Domain in complex with the PTAP motif of the p19 gag protein of the Human T-cell Leukemia type I virus
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID23-1 |
Synchrotron site | ESRF |
Beamline | ID23-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2014-06-28 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.97779 |
Spacegroup name | C 2 2 21 |
Unit cell lengths | 78.622, 119.743, 41.641 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 19.957 - 2.400 |
R-factor | 0.2306 |
Rwork | 0.230 |
R-free | 0.24310 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4eje |
RMSD bond length | 0.003 |
RMSD bond angle | 0.842 |
Data reduction software | XDS |
Data scaling software | Aimless (0.5.8) |
Phasing software | PHASER |
Refinement software | PHENIX |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 19.960 | 19.960 | 2.490 |
High resolution limit [Å] | 2.400 | 8.980 | 2.400 |
Rmerge | 0.032 | 0.020 | 0.279 |
Rpim | 0.017 | 0.012 | 0.134 |
Total number of observations | 37420 | 635 | 4376 |
Number of reflections | 8020 | ||
<I/σ(I)> | 34.6 | 62.6 | 9.7 |
Completeness [%] | 99.8 | 91.2 | 100 |
Redundancy | 4.7 | 3.8 | 5.3 |
CC(1/2) | 0.999 | 0.999 | 0.977 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6 | 298 | 30% PEG4k, 0.1 ammonium sulfate, 0.1 MES |