4ZID
Dimeric Hydrogenobacter thermophilus cytochrome c552 obtained from Escherichia coli
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SPRING-8 BEAMLINE BL38B1 |
Synchrotron site | SPring-8 |
Beamline | BL38B1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2013-06-09 |
Detector | ADSC QUANTUM 315 |
Wavelength(s) | 1.0000 |
Spacegroup name | P 31 2 1 |
Unit cell lengths | 45.808, 45.808, 78.304 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 39.670 - 1.800 |
R-factor | 0.1688 |
Rwork | 0.167 |
R-free | 0.20350 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3vym |
RMSD bond length | 0.032 |
RMSD bond angle | 2.847 |
Data reduction software | REFMAC (5.8.0107) |
Data scaling software | HKL-2000 |
Phasing software | MOLREP |
Refinement software | REFMAC (5.8.0107) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 1.860 |
High resolution limit [Å] | 1.800 | 1.800 |
Rmerge | 0.070 | 0.649 |
Number of reflections | 9242 | |
<I/σ(I)> | 37.5 | 2.2 |
Completeness [%] | 99.2 | 93.9 |
Redundancy | 9.7 | 7.1 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 293 | 1.6 M sodium citrate buffer |