4ZH0
Structure of Helicobacter pylori adhesin BabA determined by SeMet SAD
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID23-1 |
Synchrotron site | ESRF |
Beamline | ID23-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2014-09-01 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.979 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 60.830, 93.040, 96.920 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 67.120 - 1.910 |
R-factor | 0.19044 |
Rwork | 0.188 |
R-free | 0.23039 |
Structure solution method | SAD |
RMSD bond length | 0.019 |
RMSD bond angle | 1.788 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | SHELXDE |
Refinement software | REFMAC (5.8.0107) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 67.120 | 1.980 |
High resolution limit [Å] | 1.910 | 1.910 |
Rmerge | 0.236 | 3.430 |
Number of reflections | 39877 | |
<I/σ(I)> | 13.2 | 0.9 |
Completeness [%] | 96.7 | 89.2 |
Redundancy | 23.1 | 13.8 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 5.6 | 293 | 22% PEG 3350, 0.2M Ammonium Acetate, 0.1M Citrate pH 5.6 |