4ZAJ
2.2 Angstrom Crystal Structure of a Human Arginyl-tRNA Synthetase
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 21-ID-G |
Synchrotron site | APS |
Beamline | 21-ID-G |
Temperature [K] | 100 |
Detector technology | IMAGE PLATE |
Collection date | 2015-03-26 |
Detector | MAR scanner 300 mm plate |
Wavelength(s) | 0.97857 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 54.720, 61.920, 208.470 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 38.160 - 2.220 |
R-factor | 0.2211 |
Rwork | 0.219 |
R-free | 0.26430 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4q2t |
RMSD bond length | 0.009 |
RMSD bond angle | 1.318 |
Data reduction software | xia2 |
Data scaling software | xia2 (0.3.8.0\) |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0103) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 38.160 | 38.160 | 2.280 |
High resolution limit [Å] | 2.220 | 9.930 | 2.220 |
Rmerge | 0.130 | 0.049 | 0.681 |
Rpim | 0.053 | 0.021 | 0.294 |
Total number of observations | 270841 | 2717 | 18079 |
Number of reflections | 35995 | ||
<I/σ(I)> | 12.2 | 28 | 2.9 |
Completeness [%] | 100.0 | 97.4 | 100 |
Redundancy | 7.5 | 5.7 | 6.9 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 293 | 25% PEG 1000 |