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4ZA4

Structure of A. niger Fdc1 with the prenylated-flavin cofactor in the iminium form.

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsDIAMOND BEAMLINE I04
Synchrotron siteDiamond
BeamlineI04
Temperature [K]100
Detector technologyPIXEL
Collection date2014-03-09
DetectorPSI PILATUS 6M
Wavelength(s)0.987
Spacegroup nameP 21 21 2
Unit cell lengths95.990, 63.930, 87.630
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution33.820 - 1.220
R-factor0.14652
Rwork0.146
R-free0.16111
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.028
RMSD bond angle2.384
Data reduction softwarexia2
Data scaling softwarexia2
Phasing softwarePHASER
Refinement softwareREFMAC (5.5.0102)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]33.8201.250
High resolution limit [Å]1.2201.220
Rpim0.0370.354
Number of reflections152260
<I/σ(I)>11.22
Completeness [%]100.099.99
Redundancy6.15.8
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP277Initial screening of 0.3 microl 14 mg/ml A. niger Fdc1 in 100 mM NaCl, 25 mM Tris pH 7.5 and 0.3 microl reservoir solution at 4C resulted in a number of hits including PACT condition F4 (molecular dimensions). Seed stock produced from these crystals was used in an optimization screen based around 0.2 M potassium thiocyanate, Bis-Tris propane 6.5, 20 % w/v PEG 3350 mixing 0.05 microl seed stock, 0.25 microl protein solution and 0.3 microl reservoir solution at 4C.

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