4Z86
Crystal structure of Peptidyl-tRNA hydrolase mutant -N118D from Vibrio cholerae at 1.63A resolution.
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU FR-E+ SUPERBRIGHT |
Temperature [K] | 100 |
Detector technology | IMAGE PLATE |
Collection date | 2014-12-29 |
Detector | RIGAKU RAXIS IV++ |
Wavelength(s) | 1.5418 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 44.112, 71.124, 124.030 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 50.000 - 1.630 |
R-factor | 0.17201 |
Rwork | 0.170 |
R-free | 0.20690 |
RMSD bond length | 0.021 |
RMSD bond angle | 2.080 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | HKL-2000 |
Refinement software | REFMAC (5.8.0049) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 62.010 | 1.690 |
High resolution limit [Å] | 1.630 | 1.630 |
Number of reflections | 49251 | |
<I/σ(I)> | 51.92 | 4.68 |
Completeness [%] | 98.9 | 95.7 |
Redundancy | 6.1 | 5.7 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 8 | 291 | 100mM Soduim citrate, 200mM Ammonium acetate, 25% Polyethylene glycol 4000 |