4Z67
The 1.5-angstrom crystal structure of Mn(2+)-bound PqqB from Pseudomonas Putida
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | APS BEAMLINE 23-ID-D |
| Synchrotron site | APS |
| Beamline | 23-ID-D |
| Temperature [K] | 108 |
| Detector technology | PIXEL |
| Collection date | 2014-02-22 |
| Detector | DECTRIS PILATUS 6M |
| Wavelength(s) | 0.987 |
| Spacegroup name | P 43 21 2 |
| Unit cell lengths | 86.327, 86.327, 107.064 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 29.350 - 1.500 |
| R-factor | 0.1444 |
| Rwork | 0.143 |
| R-free | 0.17430 |
| Structure solution method | MOLECULAR REPLACEMENT |
| RMSD bond length | 0.016 |
| RMSD bond angle | 1.602 |
| Data reduction software | XDS |
| Data scaling software | Aimless (0.2.17) |
| Phasing software | PHASER (2.5.1) |
| Refinement software | PHENIX |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 29.350 | 29.350 | 1.520 |
| High resolution limit [Å] | 1.500 | 8.200 | 1.500 |
| Rmerge | 0.065 | 0.038 | 0.914 |
| Rpim | 0.023 | 0.014 | 0.464 |
| Total number of observations | 567404 | 3805 | 14105 |
| Number of reflections | 65627 | ||
| <I/σ(I)> | 19 | 43.9 | 1.5 |
| Completeness [%] | 99.7 | 97.5 | 96 |
| Redundancy | 8.6 | 7.9 | 4.6 |
| CC(1/2) | 0.999 | 0.999 | 0.439 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 6.7 | 298 | 11% PEG4000, 0.2M NaCl, 1 mM MnCl2, 1 mM Malic acid, 0.1M Bis-Tris Propane pH6.7 |






