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4Z4Y

Crystal structure of GII.10 P domain in complex with 7.5mM B antigen (trisaccharide)

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsESRF BEAMLINE MASSIF-1
Synchrotron siteESRF
BeamlineMASSIF-1
Temperature [K]100
Detector technologyPIXEL
DetectorDECTRIS PILATUS3 2M
Wavelength(s)0.984463
Spacegroup nameP 1 21 1
Unit cell lengths65.123, 78.671, 69.775
Unit cell angles90.00, 100.36, 90.00
Refinement procedure
Resolution43.200 - 1.797
R-factor0.1474
Rwork0.145
R-free0.18340
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)3onu
RMSD bond length0.010
RMSD bond angle1.243
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwarePHASER
Refinement softwarePHENIX
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]43.2001.861
High resolution limit [Å]1.7971.797
Rmerge0.048
Number of reflections63976
<I/σ(I)>186.12
Completeness [%]99.195.54
Redundancy3.23.1
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP7.5291sodium nitrate, bis-tris propane, PEG3350

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PDB entries from 2025-06-11

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