4Z4Q
Quinazolinedione(PD 0305970)-DNA cleavage complex of topoisomerase IV from S. pneumoniae
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I24 |
Synchrotron site | Diamond |
Beamline | I24 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2012-07-26 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.96860 |
Spacegroup name | P 31 2 1 |
Unit cell lengths | 158.020, 158.020, 211.220 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 44.588 - 3.040 |
R-factor | 0.1639 |
Rwork | 0.162 |
R-free | 0.20470 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3k9f |
RMSD bond length | 0.011 |
RMSD bond angle | 1.410 |
Data reduction software | xia2 |
Data scaling software | xia2 |
Phasing software | PHASER |
Refinement software | PHENIX (1.8_1069) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 44.590 | 2.950 |
High resolution limit [Å] | 2.880 | 2.880 |
Rmerge | 0.087 | 0.680 |
Number of reflections | 69416 | |
<I/σ(I)> | 6.598 | 1.11 |
Completeness [%] | 99.9 | 99.89 |
Redundancy | 6.45 | 5.79 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 297 | 50 mM Na cacodylate, 100-150 mM NaCl, 4-7% isopropanol |