4Z3C
Zinc finger region of human TET3 in complex with CpG DNA
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 19-ID |
Synchrotron site | APS |
Beamline | 19-ID |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2013-06-20 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.97918 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 27.616, 54.744, 40.228 |
Unit cell angles | 90.00, 103.53, 90.00 |
Refinement procedure
Resolution | 39.110 - 1.570 |
R-factor | 0.2164 |
Rwork | 0.215 |
R-free | 0.25250 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4hp3 |
RMSD bond length | 0.017 |
RMSD bond angle | 1.667 |
Data scaling software | Aimless (0.5.7) |
Phasing software | PHASER |
Refinement software | REFMAC |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 39.110 | 39.110 | 1.600 |
High resolution limit [Å] | 1.570 | 8.600 | 1.570 |
Rmerge | 0.070 | 0.040 | 1.070 |
Rpim | 0.042 | 0.029 | 0.665 |
Total number of observations | 59473 | 295 | 2848 |
Number of reflections | 16318 | ||
<I/σ(I)> | 10.4 | 27 | 1.1 |
Completeness [%] | 99.7 | 90.4 | 99.8 |
Redundancy | 3.6 | 3 | 3.5 |
CC(1/2) | 0.998 | 0.995 | 0.464 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION | 7.5 | 291 | 30% PEG-1500, 0.2 M sodium chloride, 0.1 M HEPES |