4YWQ
Crystal structure of the ROQ domain of human Roquin-1
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 19-ID |
Synchrotron site | APS |
Beamline | 19-ID |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2014-11-28 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.97926 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 171.205, 29.560, 59.926 |
Unit cell angles | 90.00, 101.55, 90.00 |
Refinement procedure
Resolution | 50.000 - 1.700 |
R-factor | 0.1998 |
Rwork | 0.199 |
R-free | 0.23690 |
Structure solution method | SAD |
RMSD bond length | 0.009 |
RMSD bond angle | 1.388 |
Data reduction software | HKL-3000 |
Data scaling software | SCALEPACK |
Phasing software | SOLVE |
Refinement software | REFMAC (5.8.0103) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 1.730 |
High resolution limit [Å] | 1.700 | 4.610 | 1.700 |
Rmerge | 0.125 | 0.085 | 0.729 |
Rmeas | 0.140 | 0.096 | 0.829 |
Rpim | 0.063 | 0.043 | 0.389 |
Total number of observations | 157706 | ||
Number of reflections | 32886 | ||
<I/σ(I)> | 7.1 | ||
Completeness [%] | 99.6 | 97.1 | 99.9 |
Redundancy | 4.8 | 4.7 | 4.3 |
CC(1/2) | 0.990 | 0.642 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.5 | 293 | Protein mixed with elastase at 1:1000 (w/w) ratio right before crystallization, 25% PEG8000, 0.2 M sodium chloride, 0.1 M HEPES, pH 7.5 |