4YV1
Crystal structure of Trypanosoma cruzi spermidine synthase in complex with quinolin-8-yl piperidine-1-carboxylate
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PHOTON FACTORY BEAMLINE AR-NE3A |
Synchrotron site | Photon Factory |
Beamline | AR-NE3A |
Temperature [K] | 90 |
Detector technology | CCD |
Collection date | 2014-01-20 |
Detector | ADSC QUANTUM 270 |
Wavelength(s) | 1.0 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 43.424, 99.269, 135.062 |
Unit cell angles | 90.00, 90.54, 90.00 |
Refinement procedure
Resolution | 34.150 - 1.850 |
R-factor | 0.19813 |
Rwork | 0.196 |
R-free | 0.24531 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3bwb |
RMSD bond length | 0.018 |
RMSD bond angle | 2.000 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | AMoRE |
Refinement software | REFMAC (5.8.0049) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 34.150 | 1.898 |
High resolution limit [Å] | 1.850 | 1.850 |
Rmerge | 0.069 | 0.446 |
Number of reflections | 92299 | |
<I/σ(I)> | 23.5 | 3.1 |
Completeness [%] | 99.5 | 99.45 |
Redundancy | 3.6 | 3.5 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 298 | PEG4000, ammonium sulfate, bis-Tris |