4YT2
Hmd II from Methanocaldococcus jannaschii
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X10SA |
Synchrotron site | SLS |
Beamline | X10SA |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2011-07-26 |
Detector | PSI PILATUS 6M |
Wavelength(s) | 1.000 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 52.520, 77.810, 153.540 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 43.532 - 1.650 |
R-factor | 0.1821 |
Rwork | 0.180 |
R-free | 0.21790 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | SeMet-HmdII from M. jannaschii |
RMSD bond length | 0.012 |
RMSD bond angle | 1.434 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | MOLREP |
Refinement software | PHENIX |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 1.700 | |
High resolution limit [Å] | 1.650 | 12.000 | 1.650 |
Rmerge | 0.064 | 0.036 | 0.565 |
Rmeas | 0.072 | 0.041 | 0.632 |
Total number of observations | 373503 | ||
Number of reflections | 76381 | 246 | 6462 |
<I/σ(I)> | 12.08 | 29.95 | 2.94 |
Completeness [%] | 99.7 | 93.5 | 100 |
Redundancy | 4.9 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 4.2 | 281 | 40% (v/v) PEG 300, 100 mM phosphate-citrate buffer |