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4YSF

Resting state of rat cysteine dioxygenase H155N variant

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAUSTRALIAN SYNCHROTRON BEAMLINE MX1
Synchrotron siteAustralian Synchrotron
BeamlineMX1
Temperature [K]93
Detector technologyCCD
Collection date2014-10-03
DetectorADSC QUANTUM 210r
Wavelength(s)0.953700
Spacegroup nameP 43 21 2
Unit cell lengths57.306, 57.306, 121.904
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution33.745 - 1.940
R-factor0.1674
Rwork0.165
R-free0.21500
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)4kwj
RMSD bond length0.009
RMSD bond angle1.074
Data reduction softwareXDS
Data scaling softwareAimless (0.3.11)
Phasing softwarePHASER (2.5.6)
Refinement softwarePHENIX (1.9-1692)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]41.75041.7501.990
High resolution limit [Å]1.9408.6601.940
Rmerge0.1040.0230.800
Rpim0.0280.0070.219
Total number of observations222857230016237
Number of reflections15885
<I/σ(I)>26.295.63.9
Completeness [%]100.099.299.5
Redundancy149.914.1
CC(1/2)0.9991.0000.885
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP6.2291Hanging drops of 2.5 microL of approximately 24 mg/mL H155N-CDO (10 mM sodiumphosphate, 20 mM NaCl pH 7.5) and 2.5 microL reservoir buffer containg H155N-CDO crushed seeds were allowed to equilibrate above the reservoir buffer (26% (w/v) polyethylene glycol 4000, 200 mM ammonium acetate, 100 mM sodium citrate).

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PDB entries from 2024-07-31

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