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4YS6

CRYSTAL STRUCTURE OF AN ABC TRANSPORTER SOLUTE BINDING PROTEIN (IPR025997) FROM CLOSTRIDIUM PHYTOFERMENTANS (Cphy_1585, TARGET EFI-511156) WITH BOUND BETA-D-GLUCOSE

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 31-ID
Synchrotron siteAPS
Beamline31-ID
Temperature [K]100
Detector technologyCCD
Collection date2015-02-11
DetectorRAYONIX MX225HE
Wavelength(s)0.9793
Spacegroup nameP 65 2 2
Unit cell lengths80.686, 80.686, 170.004
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution23.938 - 1.698
R-factor0.1504
Rwork0.149
R-free0.18250
Structure solution methodSAD
RMSD bond length0.010
RMSD bond angle1.254
Data reduction softwareHKL-3000
Data scaling softwareAimless (0.5.1)
Phasing softwareSHELX
Refinement softwarePHENIX ((phenix.refine: 1.9_1692))
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]100.00032.8601.730
High resolution limit [Å]1.6987.1201.690
Rmerge0.1020.2290.000
Rpim0.0330.041
Total number of observations2098044210976547
Number of reflections36742
<I/σ(I)>20.325.52.4
Completeness [%]99.898.799.4
Redundancy11.734.211
CC(1/2)0.0100.967
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP7298Protein (10 mM HEPES pH 7.5, 5 mM DTT, 5 mM D-glucose); Reservoir (MCSG2 B1)(1.1 M Sodium Malonate pH 7.0, 0.1 M HEPES pH 7.0, 0.5 %(v/v) Jeffamine ED-2001 pH 7.0); Cryoprotection (100% Reservoir, dehydration)

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PDB entries from 2024-07-17

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