Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

4YMC

Lambda-[Ru(TAP)2(dppz)]2+ bound to d(CCGGATCCGG)2

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsDIAMOND BEAMLINE I02
Synchrotron siteDiamond
BeamlineI02
Temperature [K]100
Detector technologyPIXEL
Collection date2015-02-28
DetectorDECTRIS PILATUS 6M-F
Wavelength(s)0.97949
Spacegroup nameP 43 21 2
Unit cell lengths47.380, 47.380, 33.830
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution33.830 - 1.880
R-factor0.20028
Rwork0.198
R-free0.25736
Structure solution methodSAD
RMSD bond length0.015
RMSD bond angle2.681
Data reduction softwarexia2
Data scaling softwarexia2
Phasing softwareSHELX
Refinement softwareREFMAC (5.8.0073)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]33.8301.930
High resolution limit [Å]1.8801.880
Rmerge0.0521.436
Number of reflections3423
<I/σ(I)>21.11.8
Completeness [%]99.9100
Redundancy11.712.3
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP7291The crystals were grown, using the sitting drop method, by adding 1 uL of 2mM d(CCGGATCCGG) and 1 uL 4 mM rac-[Ru(TAP)2(dppz)].2Cl to 6 uL of a solution containing 10% (v/v) 2-methyl-2,4-pentanediol, 12 mM spermine-tetraHCL, 20mM BaCl2, 80mM KCl and 40 mM Na-cacodylate pH 7. This was equilibrated, at 18 C, against 500 uL 2-methyl-2,4-pentanediol.

222926

PDB entries from 2024-07-24

PDB statisticsPDBj update infoContact PDBjnumon