4YK2
Crystal Structure of the BID Domain of Bep9 from Bartonella clarridgeiae
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | APS BEAMLINE 21-ID-G |
| Synchrotron site | APS |
| Beamline | 21-ID-G |
| Temperature [K] | 100 |
| Detector technology | CCD |
| Collection date | 2014-02-26 |
| Detector | MARMOSAIC 300 mm CCD |
| Wavelength(s) | 0.97857 |
| Spacegroup name | P 21 21 2 |
| Unit cell lengths | 76.680, 62.310, 71.040 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 46.844 - 2.050 |
| R-factor | 0.1732 |
| Rwork | 0.171 |
| R-free | 0.21370 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 4yk1 |
| RMSD bond length | 0.007 |
| RMSD bond angle | 0.983 |
| Data reduction software | XDS |
| Data scaling software | XSCALE |
| Phasing software | MR-Rosetta |
| Refinement software | PHENIX |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 50.000 | 2.100 | |
| High resolution limit [Å] | 2.050 | 9.170 | 2.050 |
| Rmerge | 0.061 | 0.018 | 0.548 |
| Rmeas | 0.068 | 0.021 | 0.611 |
| Total number of observations | 106806 | ||
| Number of reflections | 21863 | 259 | 1597 |
| <I/σ(I)> | 19.33 | 59.59 | 3.18 |
| Completeness [%] | 99.2 | 85.5 | 99.3 |
| Redundancy | 4.9 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 5.6 | 289 | 1:1 24.7 mg/mL protein and MCSG1(c8) (0.2 M ammonium sulfate, 0.1 M sodium citrate/HCl, pH 5.6, 25% PEG4000), cryoprotectant: 20% ethylene glycol |






