4YK1
Crystal Structure of the BID Domain of Bep6 from Bartonella rochalimae
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | CLSI BEAMLINE 08ID-1 |
Synchrotron site | CLSI |
Beamline | 08ID-1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2015-02-01 |
Detector | RAYONIX MX-300 |
Wavelength(s) | 0.979490 |
Spacegroup name | P 41 2 2 |
Unit cell lengths | 79.250, 79.250, 85.970 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 46.945 - 2.100 |
R-factor | 0.1784 |
Rwork | 0.177 |
R-free | 0.20310 |
Structure solution method | SAD |
RMSD bond length | 0.008 |
RMSD bond angle | 0.925 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | PHENIX |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 9.390 | 2.150 |
High resolution limit [Å] | 2.100 | 6.640 | 2.100 |
Rmerge | 0.070 | 0.028 | 0.582 |
Rmeas | 0.072 | 0.029 | 0.601 |
Total number of observations | 473778 | ||
Number of reflections | 16570 | 626 | 2236 |
<I/σ(I)> | 29.98 | 75.22 | 5.32 |
Completeness [%] | 100.0 | 100 | 100 |
Redundancy | 15.5 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 289 | 1:1 19.68 mg/mL protein and MCSG3(a1) (0.1 M sodium cacodylate/HCl, pH 6.5, 1 M sodium citrate tribasic), cryoprotectant: 20% ethylene glycol |