4YJN
Calcium-Dependent Protein Kinase 1 from Toxoplasma gondii (TgCDPK1) in complex with inhibitor UW1639
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRL BEAMLINE BL12-2 |
Synchrotron site | SSRL |
Beamline | BL12-2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2014-03-16 |
Detector | PSI PILATUS 6M |
Wavelength(s) | 0.9795 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 48.300, 72.640, 65.710 |
Unit cell angles | 90.00, 99.72, 90.00 |
Refinement procedure
Resolution | 64.770 - 2.600 |
R-factor | 0.2164 |
Rwork | 0.215 |
R-free | 0.24900 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4ona |
RMSD bond length | 0.013 |
RMSD bond angle | 1.598 |
Data reduction software | MOSFLM |
Data scaling software | Aimless (0.1.26) |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0073) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 72.640 | 72.640 | 2.720 |
High resolution limit [Å] | 2.600 | 9.010 | 2.600 |
Rmerge | 0.215 | 0.067 | 1.749 |
Rpim | 0.097 | 0.031 | 0.801 |
Total number of observations | 72119 | 1812 | 8584 |
Number of reflections | 12536 | ||
<I/σ(I)> | 5.1 | 11 | 1.1 |
Completeness [%] | 90.6 | 86 | 92.4 |
Redundancy | 5.8 | 5.9 | 5.5 |
CC(1/2) | 0.984 | 0.996 | 0.402 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7 | 298 | 24% PEG 3350, 0.275 M ammonium citrate, 5 mM DTT, 2 mM UW1639 |