4YIC
CRYSTAL STRUCTURE OF A TRAP TRANSPORTER SOLUTE BINDING PROTEIN (IPR025997) FROM BORDETELLA BRONCHISEPTICA RB50 (BB0280, TARGET EFI-500035) WITH BOUND PICOLINIC ACID
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 31-ID |
Synchrotron site | APS |
Beamline | 31-ID |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2015-02-11 |
Detector | RAYONIX MX225HE |
Wavelength(s) | 0.9793 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 64.681, 86.141, 72.339 |
Unit cell angles | 90.00, 100.86, 90.00 |
Refinement procedure
Resolution | 25.562 - 1.600 |
R-factor | 0.1442 |
Rwork | 0.143 |
R-free | 0.17290 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2hzl |
RMSD bond length | 0.010 |
RMSD bond angle | 1.213 |
Data reduction software | MOSFLM |
Data scaling software | Aimless (0.5.1) |
Phasing software | MOLREP |
Refinement software | PHENIX |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 27.150 | 27.150 | 1.630 |
High resolution limit [Å] | 1.600 | 8.760 | 1.600 |
Rmerge | 0.066 | 0.021 | 0.835 |
Rpim | 0.040 | 0.014 | 0.501 |
Total number of observations | 379830 | 1760 | 18350 |
Number of reflections | 101931 | ||
<I/σ(I)> | 10.7 | 29.5 | 1.6 |
Completeness [%] | 99.4 | 81.5 | 98.8 |
Redundancy | 3.7 | 3.3 | 3.7 |
CC(1/2) | 0.998 | 0.999 | 0.715 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7 | 298 | Protein (10 mM HEPES pH 7.5, 5 mM DTT, 1mM CaCl2, 1 mM Picolinic Acid); Reservoir ((MCSG2 B7 D3)(0.1 M Bis-Tris Propane pH 7.0, 2.8 M Sodium Acetate pH 7.0)); Cryoprotection (20% glycerol, 80% Reservoir) |