4YGC
Crystal structure of ERGIC-53/MCFD2, monoclinic calcium-bound form 1
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SPRING-8 BEAMLINE BL44XU |
Synchrotron site | SPring-8 |
Beamline | BL44XU |
Temperature [K] | 95 |
Detector technology | CCD |
Collection date | 2011-07-24 |
Detector | RAYONIX MX225HE |
Wavelength(s) | 0.90000 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 73.616, 168.892, 73.955 |
Unit cell angles | 90.00, 119.86, 90.00 |
Refinement procedure
Resolution | 20.000 - 2.400 |
R-factor | 0.207 |
Rwork | 0.205 |
R-free | 0.24600 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3a4u |
RMSD bond length | 0.013 |
RMSD bond angle | 1.509 |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | MOLREP |
Refinement software | REFMAC (5.7.0029) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.440 |
High resolution limit [Å] | 2.400 | 2.400 |
Rmerge | 0.056 | 0.188 |
Number of reflections | 61313 | |
<I/σ(I)> | 38.6 | 9.8 |
Completeness [%] | 99.7 | 100 |
Redundancy | 3.7 | 3.7 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 8.5 | 293 | 17% PEG8000, 8% ethylene glycol, 0.1 M Tris-HCl |