4YER
Crystal structure of an ABC transporter ATP-binding protein (TM_1403) from Thermotoga maritima MSB8 at 2.35 A resolution
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRL BEAMLINE BL1-5 |
Synchrotron site | SSRL |
Beamline | BL1-5 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2007-02-22 |
Detector | ADSC QUANTUM 4 |
Wavelength(s) | 0.999974 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 61.310, 101.180, 110.210 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 29.725 - 2.350 |
R-factor | 0.2236 |
Rwork | 0.223 |
R-free | 0.24160 |
Structure solution method | MAD |
RMSD bond length | 0.009 |
RMSD bond angle | 0.960 |
Data reduction software | XDS |
Data scaling software | SCALA (3.3.20) |
Phasing software | SHELX |
Refinement software | BUSTER-TNT (2.10.0) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 29.725 | 29.725 | 2.410 |
High resolution limit [Å] | 2.350 | 10.510 | 2.350 |
Rmerge | 0.038 | 0.800 | |
Rmeas | 0.096 | 0.046 | 0.921 |
Rpim | 0.048 | 0.024 | 0.452 |
Total number of observations | 117826 | 1200 | 8712 |
Number of reflections | 29295 | ||
<I/σ(I)> | 10.6 | 24.6 | 1.9 |
Completeness [%] | 99.9 | 95.2 | 100 |
Redundancy | 4 | 3.3 | 4.1 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 4.28 | 293 | 54.0% polyethylene glycol 200, 0.2M sodium chloride, 0.1M phosphate-citrate pH 4.28 |
1 | VAPOR DIFFUSION, SITTING DROP | 4.28 | 293 | 54.0% polyethylene glycol 200, 0.2M sodium chloride, 0.1M phosphate-citrate pH 4.28 |
1 | VAPOR DIFFUSION, SITTING DROP | 4.28 | 293 | 54.0% polyethylene glycol 200, 0.2M sodium chloride, 0.1M phosphate-citrate pH 4.28 |
1 | VAPOR DIFFUSION, SITTING DROP | 4.28 | 293 | 54.0% polyethylene glycol 200, 0.2M sodium chloride, 0.1M phosphate-citrate pH 4.28 |
1 | VAPOR DIFFUSION, SITTING DROP | 4.28 | 293 | 54.0% polyethylene glycol 200, 0.2M sodium chloride, 0.1M phosphate-citrate pH 4.28 |
2 | VAPOR DIFFUSION, SITTING DROP | 4.2 | 293 | 0.2M sodium chloride, 55.0% polyethylene glycol 200, 0.1M phosphate-citrate pH 4.2 |