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4YD3

Endothiapepsin in complex with fragment 224

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsBESSY BEAMLINE 14.1
Synchrotron siteBESSY
Beamline14.1
Temperature [K]100
Detector technologyCCD
Collection date2013-04-04
DetectorMARMOSAIC 225 mm CCD
Wavelength(s)0.918409
Spacegroup nameP 1 21 1
Unit cell lengths45.339, 73.242, 52.728
Unit cell angles90.00, 109.68, 90.00
Refinement procedure
Resolution42.691 - 1.248
R-factor0.1121
Rwork0.111
R-free0.13190
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)3pcw
RMSD bond length0.006
RMSD bond angle1.229
Data reduction softwareXDS
Data scaling softwareXSCALE
Refinement softwarePHENIX (dev_1779)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]42.6911.320
High resolution limit [Å]1.2481.250
Rmerge0.331
Number of reflections86779
<I/σ(I)>18.93.3
Completeness [%]96.591
Redundancy3.43.3
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP4.62900.1 M ammonium acetate, 0.1 M sodium acetate, 24-30% PEG 4000. crystals obtained by streak-seeding

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PDB entries from 2024-10-30

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